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'''
Created on Mar 7, 2014
Plot anomalies around climatology using colors
@author: Christoph Paulik christoph.paulik@geo.tuwien.ac.at
'''
import matplotlib.pyplot as plt
import matplotlib.gridspec as gridspec
import pandas as pd
import pytesmo.time_series.anomaly as anom
[docs]def plot_clim_anom(df, clim=None, axes=None, markersize=0.75,
mfc='0.3', mec='0.3', clim_color='0.0',
clim_linewidth=0.5, clim_linestyle='-',
pos_anom_color='#799ADA', neg_anom_color='#FD8086',
anom_linewidth=0.2, add_titles=True):
"""
Takes a pandas DataFrame and calculates the climatology and anomaly
and plots them in a nice way for each column
Parameters
----------
df : pandas.DataFrame
clim : pandas.DataFrame, optional
if given these climatologies will be used
if not given then climatologies will be calculated
this DataFrame must have the same number of columns as df
and also the column names.
each climatology must have doy as index.
axes : list of matplotlib.Axes, optional
list of axes on which each column should be plotted
if not given a standard layout is generated
markersize : float, optional
size of the markers for the datapoints
mfc : matplotlib color, optional
markerfacecolor, color of the marker face
mec : matplotlib color, optional
markeredgecolor
clim_color : matplotlib color, optional
color of the climatology
clim_linewidth : float, optional
linewidth of the climatology
clim_linestyle : string, optional
linestyle of the climatology
pos_anom_color : matplotlib color, optional
color of the positive anomaly
neg_anom_color : matplotlib color, optional
color of the negative anomaly
anom_linewidth : float, optional
linewidth of the anomaly lines
add_titles : boolean, optional
if set each subplot will have it's column name as title
Default : True
Returns
-------
Figure : matplotlib.Figure
if no axes were given
axes : list of matploblib.Axes
if no axes were given
"""
if type(df) == pd.Series:
df = pd.DataFrame(df)
nr_columns = len(df.columns)
# make own axis if necessary
if axes is None:
own_axis = True
gs = gridspec.GridSpec(nr_columns, 1, right=0.8)
fig = plt.figure(num=None, figsize=(6, 2 * nr_columns),
dpi=150, facecolor='w', edgecolor='k')
last_axis = fig.add_subplot(gs[nr_columns - 1])
axes = []
for i, grid in enumerate(gs):
if i < nr_columns - 1:
ax = fig.add_subplot(grid, sharex=last_axis)
axes.append(ax)
ax.xaxis.set_visible(False)
axes.append(last_axis)
else:
own_axis = False
for i, column in enumerate(df):
Ser = df[column]
ax = axes[i]
if clim is None:
clima = anom.calc_climatology(Ser)
else:
clima = pd.Series(clim[column])
anomaly = anom.calc_anomaly(Ser, climatology=clima, return_clim=True)
anomaly[Ser.name] = Ser
anomaly = anomaly.dropna()
pos_anom = anomaly[Ser.name].values > anomaly['climatology'].values
neg_anom = anomaly[Ser.name].values < anomaly['climatology'].values
ax.plot(anomaly.index, anomaly[Ser.name].values, 'o',
markersize=markersize, mfc=mfc, mec=mec)
ax.plot(anomaly.index, anomaly['climatology'].values,
linestyle=clim_linestyle,
color=clim_color,
linewidth=clim_linewidth)
ax.fill_between(anomaly.index,
anomaly[Ser.name].values,
anomaly['climatology'].values, interpolate=True,
where=pos_anom, color=pos_anom_color,
linewidth=anom_linewidth)
ax.fill_between(anomaly.index,
anomaly[Ser.name].values,
anomaly['climatology'].values, interpolate=True,
where=neg_anom, color=neg_anom_color,
linewidth=anom_linewidth)
if add_titles:
ax.set_title(column)
if own_axis:
return fig, axes
else:
return None, None