Source code for pytesmo.time_series.filtering

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'''
Created on Oct 16, 2013

@author: Christoph Paulik christoph.paulik@geo.tuwien.ac.at
'''

import pandas as pd
import numpy as np

from cadati.jd_date import julday
from pytesmo.time_series.filters import boxcar_filter


[docs]def moving_average(Ser, window_size=1, fillna=False, min_obs=1): ''' Applies a moving average (box) filter on an input time series Parameters ---------- Ser : pandas.Series (index must be a DateTimeIndex or julian date) window_size : float, optional The size of the moving_average window [days] that will be applied on the input Series Default: 1 fillna: bool, optional Fill nan values at the center window value min_obs: int The minimum amount of observations necessary for a valid moving average Returns ------- Ser : pandas.Series moving-average filtered time series ''' # if index is datetimeindex then convert it to julian date if type(Ser.index) == pd.DatetimeIndex: jd_index = julday(np.asarray(Ser.index.month), np.asarray(Ser.index.day), np.asarray(Ser.index.year), np.asarray(Ser.index.hour), np.asarray(Ser.index.minute), np.asarray(Ser.index.second)) else: jd_index = Ser.index.values filtered = boxcar_filter( np.atleast_1d(np.squeeze(Ser.values.astype(np.double))), jd_index.astype(np.double), window=window_size, fillna=fillna, min_obs=min_obs) result = pd.Series(filtered, index=Ser.index) return result