Source code for pytesmo.time_series.grouping

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# Author: Christoph Paulik christoph.paulik@geo.tuwien.ac.at
# Creation date: 2014-06-30


"""
Module provides grouping functions that can be used together with pandas
to create a few strange timegroupings like e.g. decadal products were
there are three products per month with timestamps on the 10th 20th and last
of the month
"""

import pandas as pd
import numpy as np
from datetime import date
import calendar


[docs]def group_by_day_bin(df, bins=[1, 11, 21, 32], start=False, dtindex=None): """ Calculates timegroups for a given daterange. Groups are from day 1-10, 11-20, 21-last day of each month. Parameters ---------- df : pandas.DataFrame DataFrame with DateTimeIndex for which the grouping should be done bins : list, optional bins in day of the month, default is for dekadal grouping start : boolean, optional if set to True the start of the bin will be the timestamp for each observations dtindex : pandas.DatetimeIndex, optional precomputed DatetimeIndex that should be used for resulting groups, useful for processing of numerous datasets since it does not have to be computed for every call Returns ------- grouped : pandas.core.groupby.DataFrameGroupBy DataFrame groupby object according the the day bins on this object functions like sum() or mean() can be called to get the desired aggregation. dtindex : pandas.DatetimeIndex returned so that it can be reused if possible """ dekads = np.digitize(df.index.day, bins) if dtindex is None: dtindex = grp_to_datetimeindex(dekads, bins, df.index, start=start) grp = pd.DataFrame(df.values, columns=df.columns, index=dtindex) return grp.groupby(level=0), dtindex
[docs]def grp_to_datetimeindex(grps, bins, dtindex, start=False): """Makes a datetimeindex that has for each entry the timestamp of the bin beginning or end this entry belongs to. Parameters ---------- grps : numpy.array group numbers made by np.digitize(data, bins) bins : list bin start values e.g. [0,11,21] would be two bins one with values 0<=x<11 and the second one with 11<=x<21 dtindex : pandas.DatetimeIndex same length as grps, gives the basis datetime for each group start : boolean, optional if set to True the start of the bin will be the timestamp for each observations Returns ------- grpdt : pd.DatetimeIndex Datetimeindex where every date is the end of the bin the datetime ind the input dtindex belongs to """ dtlist = [] offset = 1 index_offset = 0 # select previous bin and do not subtract a day if start is set to True if start: offset = 0 index_offset = -1 for i, el in enumerate(dtindex): _, max_day_month = calendar.monthrange(el.year, el.month) dtlist.append(date(el.year, el.month, min([bins[grps[i] + index_offset] - offset, max_day_month]))) return pd.DatetimeIndex(dtlist)
[docs]def grouped_dates_between(start_date, end_date, bins=[1, 11, 21, 32], start=False): """ Between a start and end date give all dates that represent a bin See test for example. Parameters ---------- start_date: date start date end_date: date end date bins: list, optional bin start values as days in a month e.g. [0,11,21] would be two bins one with values 0<=x<11 and the second one with 11<=x<21 start: boolean, optional if True the start of the bins is the representative date Returns ------- tstamps : list of datetimes list of representative dates between start and end date """ daily = pd.date_range(start_date, end_date, freq='D') fake_data = pd.DataFrame(np.arange(len(daily)), index=daily) grp, dtindex = group_by_day_bin(fake_data, bins=bins, start=start) tstamps = grp.sum().index.to_pydatetime().tolist() return tstamps